Bwt2glob.bam: no such file or directory
WebApr 26, 2024 · Hi Mikhail, Thank you very much for your answer. I have been running the script by chunks of code and I have found two issues. I am going to post it here just in … WebJan 9, 2015 · It appears your bomb.c file is not in gdb's source path. You'll need to use the "directory" command. See stackoverflow.com/q/21928876/10077. –
Bwt2glob.bam: no such file or directory
Did you know?
WebBash would report 'No such file or directory' of files that clearly existed with the execute attribute. sudo apt-get install --reinstall libc6-i386. Fixed the problem. These are the "GNU C Library: 32-bit shared libraries for AMD64". Seems like this is a bug in bash.WebLet's call this user, UserX. When the shell invokes this command as UserX: $ sudo ls *.*. and returns this: ls: cannot access *.*: No such file or directory. UserX's shell tried to expand the *.* to any files, but because UserX cannot read any of the contents of this directory it returns nothing.
WebFeb 18, 2024 · 0. Providing the absolute path to the .xlsx file worked for me. For situations where you cannot anticipate what the absolute path will be, try the following: import os.path pd.read_excel (io=os.path.abspath ('path\\to\\excel_file.xlsx')) 'path\to\excel_file.xlsx' should be the relative path to the .xlsx from the project root.WebJan 31, 2024 · samtools index: failed to create index for "./output.bam": No such file or directory. The strange fact is that samtools appears to have been given output.bam as …
WebMar 16, 2024 · Hi Nicolas, 1. sort -T works. It was in the 'man sort' and I also used it on a dummy file. 2. In the output, I do have a 'tmp' folder, although its empty. 3. Will change …WebOct 8, 2013 · Use -f to test for a plain file (or symlink pointing at a file), as opposed to a directory -d, block device -b, character device c, symlink -L or -h, FIFO (-p, mnemonic 'named Pipe'), etc. Use -s to test for a non-empty file.
WebMar 5, 2015 · 4. If file.h is in temp directory, add to your command in the Makefile: -Itemp. And in a.c: #include . You should use #include "file.h" when file.h is in the same directory of the file that include it. Share. Improve this answer. Follow.
WebDec 27, 2024 · 2024年 12月 27日 星期日 01:27:25 CST Bowtie2 alignment step2 ... Logs: logs/9WT/mapping_step2.logfers refund interestWebRunning the bogus ones by explicitely calling the interpreter allows the CRLF script to run without any issue: $ bash ./scriptWithCRLF ./scriptWithCRLF $ bash ./scriptWithBom ./scriptWithBom: line 1: #!/bin/bash: No such file or directory ./scriptWithBom. Here is the behavior observed under ksh:fers reductionWebOct 16, 2012 · It lets you add include search paths to the command line. Imagine that your file bar is in a folder named frobnicate, relative to foo.cc (assume you are compiling from the directory where foo.cc is located): g++ -Ifrobnicate foo.cc. You can add more include-paths; each you give is relative to the current directory. dell inspiron 15 3000 built in microphoneWebOct 15, 2010 · Therefore I used the following approach, (mentioned in Bash script – "/bin/bash^M: bad interpreter: No such file or directory" ), where you can use the sed …dell inspiron 15 3000 headphone jackWebMar 6, 2016 · [bam_header_read] invalid BAM binary header (this is not a BAM file). /home/ubuntu/HCP/HiC-Pro_2.7.4b/scripts/hic.inc.sh: line 91: 2453 Segmentation fault …fers rehired annuitant regulationsWebFeb 18, 2024 · Providing the absolute path to the .xlsx file worked for me. For situations where you cannot anticipate what the absolute path will be, try the following: import … dell inspiron 15 3000 function keysWebSep 23, 2024 · yes well done ! So the samtools sort failed. If you look at your command, -@ 36 -m 21M, means that it only has 21Mo to sort the file which is too few. So it has to …fers refund processing time 2020