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Gwas soybean

WebApr 7, 2024 · 相关研究成果以SoyOmics: A deeply integrated database on soybean multi-omics ... 为更好服务于用户,研究团队开发了多个实用的“一站式”分析模块,支撑实现GWAS分析、表达模式分析、单倍型分析、基因组坐标转换、图泛基因组可视化等。 ... WebJul 3, 2024 · In soybean, 30 SNP markers associated with 6 yield-related agronomic traits were identified by GWAS (Zatybekov et al. 2024). A certain number of loci and one candidate gene were identified by GWAS of soybean seed weight, and the gene was proved to be related to seed weight in Arabidopsis (Yan et al. 2024).

研究发布大豆多维组学数据库SoyOmics----中国科学院

WebApr 1, 2024 · In addition, the entire USDA soybean germplasm collection has been genotyped with the SoySNP50K iSelect BeadChips (Song et al. 2013, 2014, and 2015). … WebThe main objectives of this study were to (1) evaluate amino acid compositions in soybean germplasm from China, Korea, Japan and U.S. (2) identify SNP markers associated with amino acid concentrations of soybean via GWAS, and (3) explore efficiency of GS for amino acids in soybean breeding. bocavirus definition https://vortexhealingmidwest.com

全基因组关联分析(Genome-wide association study, GWAS)简 …

WebGWAS was carried out using combined environment LSMEANS generated from the analysis reported in above with a total of 27,911 SNP markers used for the following traits: soybean seed yield, seed protein concentration, seed oil concentration, plant height, 100 seed weight, days to maturity, and lodging score using FarmCPU model where P + K values … WebNov 1, 2015 · A GWAS for seed protein and oil content on over 12,000 unique G. max accessions was performed, which is the largest GWAS conducted in plants reported to date. We determined the distribution of favorable alleles among subpopulations defined by world region and maturity group (MG) of the 12,000 accessions. WebApr 11, 2024 · GWAS using the HEB-25 NAM population has recently been demonstrated as an effective tool for gene identification in barley for traits such as flowering, salinity tolerance and plant development [ 35, 36, 37, 38, 39 ]. The HEB-25 population presents a reservoir of genetic diversity that can be exploited for variety development. clockify project templates

Agronomy Free Full-Text GWAS and Identification of Candidate …

Category:Meta-GWAS for quantitative trait loci identification in …

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Gwas soybean

GWAS reveals two novel loci for photosynthesis-related traits in soybean

WebJun 18, 2024 · In soybean, linkage mapping and genome-wide association studies (GWAS) have been efficiently used as precise tools to uncover the genetic basis of quality traits . At present, a large number of QTLs associated with flowering stage, maturity stage, plant height, number of main stem nodes, 100-grain weight, protein content, fat content, and ... WebNov 14, 2024 · GWAS of agronomic traits in soybean collection included in breeding pool in Kazakhstan GWAS of agronomic traits in soybean collection included in breeding pool in Kazakhstan Authors Alibek Zatybekov 1 , Saule Abugalieva 1 , Svetlana Didorenko 2 , Yelena Gerasimova 3 , Ivan Sidorik 4 , Shynar Anuarbek 1 , Yerlan …

Gwas soybean

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WebMar 6, 2024 · In soybean, the evaluation of several specific agronomic traits, including seed protein content and oil concentration [27, 28], sudden death syndrome resistance , cyst … WebNov 14, 2024 · In soybean GWAS experiments indicated a strong bias towards environmental factors in MTA discoveries [13,14,15]. For instance, obtained results from three different GWAS studies related to the identification of QTLs for yield performance in Canada [ 16 ], USA [ 13 , 15 ], and Brazil [ 11 ] showed different responses and QTLs for …

WebAug 28, 2024 · The population for GWAS was comprised of 219 soybean accessions (including 195 landraces and 24 elite varieties) derived from 26 provinces within six ecological regions in China (latitude 53 to 24°N and longitude 134 to 97°E; Wang and Gai, 2002). The 219 soybean accessions were grown hydroponically and measured by two … WebGenome-wide association study (GWAS) has emerged in the past decade as a viable tool for identifying beneficial alleles from a genomic diversity panel. In an ongoing effort to …

WebNov 22, 2024 · In a GWAS study, Xavier and Rainey (2024) investigated the potential use of Random Forest (RF) for detecting QTL associated with soybean yield components, such as the number of pods and nodes. In … WebMain research interests : 1- Allele Specific Marker development, Molecular Breeding, and Marker Assisted Selection in Soybean 2- Genomics, Proteomics, Transcriptomics, and Functional Genomics/Systems Biology in Soybean, Blueberry, Barley, Yeast, and E-coli 3- Bioinformatics 4- Host-Pathogen Interaction Analysis Area of …

WebApr 28, 2024 · Although GWAS is a powerful strategy to analyse the genetic basis of complex traits, few studies have dissected the QTL for salinity-alkalinity tolerance of soybean by GWAS. Soybean accessions may have different degrees of salt and alkaline tolerance at different developmental stages (Phang et al. 2008; Chen et al. 2024b).

WebJan 2, 2014 · To overcome the limitations of linkage analysis, we conducted GWAs to identify the loci associated with P efficiency using 1,536 single nucleotide polymorphisms (SNPs) and the relative phenotypic values at several sites and over several years as P efficiency phenotypes generated in 192 soybean accessions. GWAs were conducted … bocavirus pregnancyWebFeb 9, 2024 · 2 Key Laboratory of Soybean Molecular Design Breeding, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, ... (GWAS)-detected quantitative trait loci (QTLs), or introgressions from indica sub-species with chronological changes in allele frequencies. Then we summarized a rice breeding trend/principle in … boca vein treatment center reviewsWebAug 28, 2024 · A soybean breeding germplasm population (279 lines) was established to perform a GWAS, and 8 QTLs were found that explained phenotypic variances ranging … clockify ptoWebCombined GWAS and eQTL analysis uncovers a genetic regulatory network orchestrating the initiation of secondary cell wall development in cotton: ... Variation in rhizosphere microbial communities and its association with the symbiotic efficiency of rhizobia in soybean: ISME JOURNAL DOI: 10.1038/s41396-020-0648-9 提前访问日期: APR 2024 ... clockify quickbooksWeb2 days ago · Soybean is an utterly important crop for high-quality meal protein and vegetative oil. Soybean seed protein content has become a key factor in nutrients for livestock feed as well as human dietary consumption. Genetic improvement of soybean seed protein is highly desired to meet the demands of rapidly growing world population. … boca view apartment rentals reviewWebMar 12, 2024 · In this study, GWAS was carried out with four photosynthesis parameters of 219 soybean accessions from different regions, 12 potential QTLs related to photosynthesis were identified, and four candidate genes involved in soybean photosynthesis were determined. It is possible to improve soybean overall productivity by modifying these … clockify redditA total of 809 soybean accessions were selected for this study. For phenotyping, all 809 accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22′N and 116°23′E) during the summer seasons in 2013 and 2014. The 275 … See more After drying at 80 °C for 2 h, approximately 5 g of mature and well-rounded seeds were milled to a fine powder with an electric grinder. Solid fractions were filtered out using a … See more The overall performances of the 809 soybean accessions were calculated as the best linear unbiased prediction (BLUP), the same … See more The re-sequencing reads of the 809 accessions were mapped to the soybean reference genome [60] (Williams 82 assembly V2.0) at the Phytozome v11.0 website … See more Among the 809 soybean accessions, 240 were obtained from our previous study [28] (Additional file 1: Table S1). The genomic DNA of the other 569 additional accessions was extracted from the young leaves of a single … See more clockify register